Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh17E9PXF0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh17E9PXF0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh17E9PXF0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh17E9PXF0 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.37■□□□□ 0.37
Pcdh17E9PXF0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdh17E9PXF0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh17E9PXF0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdh17E9PXF0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pcdh17E9PXF0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh17E9PXF0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh17E9PXF0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdh17E9PXF0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh17E9PXF0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh17E9PXF0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Gm26524-201ENSMUST00000192339 390 ntBASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Gm20049-201ENSMUST00000219950 730 ntBASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdh17E9PXF0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh17E9PXF0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh17E9PXF0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Pcdh17E9PXF0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.34■□□□□ 0.37
Pcdh17E9PXF0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh17E9PXF0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh17E9PXF0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh17E9PXF0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh17E9PXF0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdh17E9PXF0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh17E9PXF0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh17E9PXF0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdh17E9PXF0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh17E9PXF0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh17E9PXF0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh17E9PXF0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pcdh17E9PXF0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Pcdh17E9PXF0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdh17E9PXF0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh17E9PXF0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdh17E9PXF0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh17E9PXF0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdh17E9PXF0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh17E9PXF0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh17E9PXF0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms