Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Rps24-207ENSMUST00000224568 714 ntBASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-4A0A0G2JFX3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Serp2-204ENSMUST00000228055 705 ntBASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Gm45102-201ENSMUST00000207427 857 ntBASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13d-4A0A0G2JFX3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-4A0A0G2JFX3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-4A0A0G2JFX3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms