Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trav4-3A0A0B4J1K1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-3A0A0B4J1K1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-3A0A0B4J1K1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-3A0A0B4J1K1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-3A0A0B4J1K1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Gm27502-201ENSMUST00000183495 199 ntBASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-3A0A0B4J1K1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-3A0A0B4J1K1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 Gm10420-201ENSMUST00000121713 882 ntBASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav4-3A0A0B4J1K1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4-3A0A0B4J1K1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav4-3A0A0B4J1K1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4-3A0A0B4J1K1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trav4-3A0A0B4J1K1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav4-3A0A0B4J1K1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
Trav4-3A0A0B4J1K1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4-3A0A0B4J1K1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4-3A0A0B4J1K1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms