Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.11■□□□□ 0.01
Trbv5A0A0B4J1G9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv5A0A0B4J1G9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv5A0A0B4J1G9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv5A0A0B4J1G9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv5A0A0B4J1G9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.09■□□□□ 0.01
Trbv5A0A0B4J1G9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trbv5A0A0B4J1G9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv5A0A0B4J1G9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.09■□□□□ 0.01
Trbv5A0A0B4J1G9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trbv5A0A0B4J1G9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv5A0A0B4J1G9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv5A0A0B4J1G9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv5A0A0B4J1G9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv5A0A0B4J1G9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Trbv5A0A0B4J1G9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv5A0A0B4J1G9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv5A0A0B4J1G9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.08■□□□□ 0.01
Trbv5A0A0B4J1G9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv5A0A0B4J1G9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv5A0A0B4J1G9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv5A0A0B4J1G9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv5A0A0B4J1G9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.08■□□□□ 0
Trbv5A0A0B4J1G9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv5A0A0B4J1G9 Gm45444-201ENSMUST00000211394 898 ntBASIC15.08■□□□□ 0
Trbv5A0A0B4J1G9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv5A0A0B4J1G9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv5A0A0B4J1G9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv5A0A0B4J1G9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv5A0A0B4J1G9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv5A0A0B4J1G9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Fst-202ENSMUST00000223640 2612 ntBASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv5A0A0B4J1G9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv5A0A0B4J1G9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv5A0A0B4J1G9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trbv5A0A0B4J1G9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv5A0A0B4J1G9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbv5A0A0B4J1G9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv5A0A0B4J1G9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.06■□□□□ 0
Trbv5A0A0B4J1G9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.06■□□□□ 0
Trbv5A0A0B4J1G9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv5A0A0B4J1G9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.06■□□□□ 0
Trbv5A0A0B4J1G9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv5A0A0B4J1G9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trbv5A0A0B4J1G9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trbv5A0A0B4J1G9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.05■□□□□ -0
Trbv5A0A0B4J1G9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.05■□□□□ -0
Trbv5A0A0B4J1G9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv5A0A0B4J1G9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv5A0A0B4J1G9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv5A0A0B4J1G9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms