Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BC053393A0A0B4J1F6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BC053393A0A0B4J1F6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BC053393A0A0B4J1F6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BC053393A0A0B4J1F6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BC053393A0A0B4J1F6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BC053393A0A0B4J1F6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BC053393A0A0B4J1F6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BC053393A0A0B4J1F6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.99□□□□□ -0.01
BC053393A0A0B4J1F6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.99□□□□□ -0.01
BC053393A0A0B4J1F6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BC053393A0A0B4J1F6 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.99□□□□□ -0.01
BC053393A0A0B4J1F6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BC053393A0A0B4J1F6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.99□□□□□ -0.01
BC053393A0A0B4J1F6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BC053393A0A0B4J1F6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BC053393A0A0B4J1F6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BC053393A0A0B4J1F6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BC053393A0A0B4J1F6 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.98□□□□□ -0.01
BC053393A0A0B4J1F6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BC053393A0A0B4J1F6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BC053393A0A0B4J1F6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.98□□□□□ -0.01
BC053393A0A0B4J1F6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BC053393A0A0B4J1F6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BC053393A0A0B4J1F6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BC053393A0A0B4J1F6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BC053393A0A0B4J1F6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BC053393A0A0B4J1F6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.97□□□□□ -0.01
BC053393A0A0B4J1F6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BC053393A0A0B4J1F6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
BC053393A0A0B4J1F6 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.96□□□□□ -0.02
BC053393A0A0B4J1F6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BC053393A0A0B4J1F6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BC053393A0A0B4J1F6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BC053393A0A0B4J1F6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.94□□□□□ -0.02
BC053393A0A0B4J1F6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.94□□□□□ -0.02
BC053393A0A0B4J1F6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
BC053393A0A0B4J1F6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.94□□□□□ -0.02
BC053393A0A0B4J1F6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
BC053393A0A0B4J1F6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms