Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-4A0A075B6B4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-4A0A075B6B4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Trav6-4A0A075B6B4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Gm13146-201ENSMUST00000118508 780 ntBASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-4A0A075B6B4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-4A0A075B6B4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-4A0A075B6B4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-4A0A075B6B4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
Trav6-4A0A075B6B4 Gm10033-202ENSMUST00000211874 928 ntBASIC14.39□□□□□ -0.11
Trav6-4A0A075B6B4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-4A0A075B6B4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-4A0A075B6B4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-4A0A075B6B4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-4A0A075B6B4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav6-4A0A075B6B4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-4A0A075B6B4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav6-4A0A075B6B4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms