Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-7A0A075B6B0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6d-7A0A075B6B0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6d-7A0A075B6B0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6d-7A0A075B6B0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trav6d-7A0A075B6B0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Gm5874-201ENSMUST00000096101 508 ntBASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6d-7A0A075B6B0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Gm40848-201ENSMUST00000221998 324 ntBASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-7A0A075B6B0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6d-7A0A075B6B0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Smad6-203ENSMUST00000179458 273 ntBASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6d-7A0A075B6B0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 Grk6-206ENSMUST00000224995 2971 ntBASIC14.41□□□□□ -0.1
Trav6d-7A0A075B6B0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms