Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav6n-7A0A075B6A6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Iqck-206ENSMUST00000208658 2891 ntBASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-7A0A075B6A6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
Trav6n-7A0A075B6A6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-7A0A075B6A6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav6n-7A0A075B6A6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav6n-7A0A075B6A6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav6n-7A0A075B6A6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-7A0A075B6A6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-7A0A075B6A6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-7A0A075B6A6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-7A0A075B6A6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-7A0A075B6A6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-7A0A075B6A6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-7A0A075B6A6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6n-7A0A075B6A6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-7A0A075B6A6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-7A0A075B6A6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav6n-7A0A075B6A6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Gm6420-201ENSMUST00000193885 723 ntBASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav6n-7A0A075B6A6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6n-7A0A075B6A6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6n-7A0A075B6A6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6n-7A0A075B6A6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav6n-7A0A075B6A6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.85■□□□□ 0.13
Trav6n-7A0A075B6A6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms