Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav18A0A075B656 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav18A0A075B656 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav18A0A075B656 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav18A0A075B656 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
Trav18A0A075B656 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav18A0A075B656 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav18A0A075B656 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav18A0A075B656 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Trav18A0A075B656 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav18A0A075B656 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav18A0A075B656 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav18A0A075B656 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav18A0A075B656 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav18A0A075B656 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav18A0A075B656 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav18A0A075B656 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav18A0A075B656 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav18A0A075B656 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav18A0A075B656 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav18A0A075B656 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.32■□□□□ 0.04
Trav18A0A075B656 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Gm7860-201ENSMUST00000121190 879 ntBASIC15.32■□□□□ 0.04
Trav18A0A075B656 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Gm43173-201ENSMUST00000202246 593 ntBASIC15.32■□□□□ 0.04
Trav18A0A075B656 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.32■□□□□ 0.04
Trav18A0A075B656 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.32■□□□□ 0.04
Trav18A0A075B656 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav18A0A075B656 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Gm8493-201ENSMUST00000196881 489 ntBASIC15.31■□□□□ 0.04
Trav18A0A075B656 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.31■□□□□ 0.04
Trav18A0A075B656 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.31■□□□□ 0.04
Trav18A0A075B656 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav18A0A075B656 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.31■□□□□ 0.04
Trav18A0A075B656 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav18A0A075B656 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav18A0A075B656 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav18A0A075B656 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav18A0A075B656 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav18A0A075B656 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav18A0A075B656 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav18A0A075B656 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav18A0A075B656 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav18A0A075B656 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav18A0A075B656 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav18A0A075B656 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav18A0A075B656 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav18A0A075B656 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.29■□□□□ 0.04
Trav18A0A075B656 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav18A0A075B656 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms