Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16A0A075B653 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.49□□□□□ -0.09
Trav16A0A075B653 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.49□□□□□ -0.09
Trav16A0A075B653 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav16A0A075B653 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.49□□□□□ -0.09
Trav16A0A075B653 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.49□□□□□ -0.09
Trav16A0A075B653 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.49□□□□□ -0.09
Trav16A0A075B653 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav16A0A075B653 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav16A0A075B653 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.48□□□□□ -0.09
Trav16A0A075B653 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16A0A075B653 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.47□□□□□ -0.09
Trav16A0A075B653 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.47□□□□□ -0.09
Trav16A0A075B653 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16A0A075B653 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16A0A075B653 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16A0A075B653 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.46□□□□□ -0.09
Trav16A0A075B653 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16A0A075B653 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.46□□□□□ -0.09
Trav16A0A075B653 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16A0A075B653 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16A0A075B653 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16A0A075B653 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav16A0A075B653 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16A0A075B653 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16A0A075B653 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16A0A075B653 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16A0A075B653 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav16A0A075B653 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav16A0A075B653 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav16A0A075B653 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav16A0A075B653 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav16A0A075B653 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav16A0A075B653 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16A0A075B653 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms