Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav14n-3A0A075B645 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav14n-3A0A075B645 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav14n-3A0A075B645 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trav14n-3A0A075B645 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Etf1-202ENSMUST00000180351 108 ntBASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav14n-3A0A075B645 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trav14n-3A0A075B645 Fst-202ENSMUST00000223640 2612 ntBASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 Gm11175-201ENSMUST00000116172 543 ntBASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav14n-3A0A075B645 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms