Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Asgr1-203ENSMUST00000108585 1169 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Cacfd1-201ENSMUST00000114003 727 ntTSL 3 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Rhox1-201ENSMUST00000115210 883 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm12877-201ENSMUST00000120383 510 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm13675-201ENSMUST00000120616 529 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm14250-201ENSMUST00000148458 566 ntTSL 3 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm14967-201ENSMUST00000153483 335 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm22282-201ENSMUST00000158524 312 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm16026-202ENSMUST00000159695 772 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Ciao1-205ENSMUST00000174863 531 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Mir5114-201ENSMUST00000175574 61 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Trav9d-1-201ENSMUST00000178426 337 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm23283-201ENSMUST00000179362 110 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm11239-202ENSMUST00000179977 1080 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm26875-201ENSMUST00000181006 950 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm7611-201ENSMUST00000182329 1000 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm24362-201ENSMUST00000183220 416 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Kif4-ps-202ENSMUST00000185083 652 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Mrgprb11-ps-201ENSMUST00000187816 994 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm38166-201ENSMUST00000191660 471 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm38320-201ENSMUST00000192767 1281 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm43836-201ENSMUST00000196532 381 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm42634-201ENSMUST00000197362 381 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm5043-201ENSMUST00000202103 820 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm42786-201ENSMUST00000202357 280 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm44234-201ENSMUST00000204246 900 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm32916-201ENSMUST00000207884 935 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm18455-201ENSMUST00000208768 459 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm45294-201ENSMUST00000210685 2102 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm45827-201ENSMUST00000211955 311 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm18391-201ENSMUST00000217189 658 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm5176-201ENSMUST00000218244 1227 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 AC124400.2-201ENSMUST00000224939 253 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 AC102815.1-201ENSMUST00000226662 1061 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 AC114916.1-201ENSMUST00000228465 494 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Cox8b-201ENSMUST00000026561 360 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 CT025645.1-201ENSMUST00000222760 4322 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Ephx2-202ENSMUST00000224698 1985 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Slc29a3-202ENSMUST00000119595 3123 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Ltf-201ENSMUST00000035077 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Lepr-202ENSMUST00000102777 3410 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 AC122937.3-201ENSMUST00000227906 1354 ntBASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim39Q9ESN2 Pdcd1lg2-201ENSMUST00000112576 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Il12b-201ENSMUST00000102796 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Hhex-202ENSMUST00000128184 1435 ntTSL 2 BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Pttg1-204ENSMUST00000117446 1674 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Olfr323-203ENSMUST00000214132 1916 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Serpina5-201ENSMUST00000021495 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Bgn-201ENSMUST00000033741 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Lekr1-201ENSMUST00000099075 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim39Q9ESN2 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim39Q9ESN2 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms