Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Atp6ap1Q9R1Q9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Atp6ap1Q9R1Q9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Atp6ap1Q9R1Q9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Atp6ap1Q9R1Q9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Gm18671-201ENSMUST00000214826 683 ntBASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.39■□□□□ 0.53
Atp6ap1Q9R1Q9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Gm13146-201ENSMUST00000118508 780 ntBASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Atp6ap1Q9R1Q9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Atp6ap1Q9R1Q9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp6ap1Q9R1Q9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Atp6ap1Q9R1Q9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp6ap1Q9R1Q9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Atp6ap1Q9R1Q9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp6ap1Q9R1Q9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.36■□□□□ 0.53
Atp6ap1Q9R1Q9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Atp6ap1Q9R1Q9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp6ap1Q9R1Q9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp6ap1Q9R1Q9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp6ap1Q9R1Q9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atp6ap1Q9R1Q9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp6ap1Q9R1Q9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atp6ap1Q9R1Q9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp6ap1Q9R1Q9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atp6ap1Q9R1Q9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp6ap1Q9R1Q9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Atp6ap1Q9R1Q9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.35■□□□□ 0.53
Atp6ap1Q9R1Q9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.35■□□□□ 0.53
Atp6ap1Q9R1Q9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp6ap1Q9R1Q9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp6ap1Q9R1Q9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atp6ap1Q9R1Q9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.35■□□□□ 0.53
Atp6ap1Q9R1Q9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp6ap1Q9R1Q9 Gm8495-201ENSMUST00000188740 694 ntBASIC18.34■□□□□ 0.53
Atp6ap1Q9R1Q9 Gm10033-202ENSMUST00000211874 928 ntBASIC18.34■□□□□ 0.53
Atp6ap1Q9R1Q9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp6ap1Q9R1Q9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp6ap1Q9R1Q9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Atp6ap1Q9R1Q9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp6ap1Q9R1Q9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atp6ap1Q9R1Q9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atp6ap1Q9R1Q9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Atp6ap1Q9R1Q9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.33■□□□□ 0.52
Atp6ap1Q9R1Q9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp6ap1Q9R1Q9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
Atp6ap1Q9R1Q9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp6ap1Q9R1Q9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp6ap1Q9R1Q9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms