Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sec61a2Q9JLR1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sec61a2Q9JLR1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sec61a2Q9JLR1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sec61a2Q9JLR1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sec61a2Q9JLR1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sec61a2Q9JLR1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sec61a2Q9JLR1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sec61a2Q9JLR1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a2Q9JLR1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a2Q9JLR1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a2Q9JLR1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.88■□□□□ 0.29
Sec61a2Q9JLR1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a2Q9JLR1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a2Q9JLR1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a2Q9JLR1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a2Q9JLR1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a2Q9JLR1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a2Q9JLR1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sec61a2Q9JLR1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a2Q9JLR1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a2Q9JLR1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a2Q9JLR1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a2Q9JLR1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a2Q9JLR1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sec61a2Q9JLR1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sec61a2Q9JLR1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Sec61a2Q9JLR1 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.83■□□□□ 0.29
Sec61a2Q9JLR1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sec61a2Q9JLR1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a2Q9JLR1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Sec61a2Q9JLR1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms