Protein–RNA interactions for Protein: Q9JJ89

Ccdc86, Coiled-coil domain-containing protein 86, mousemouse

Predictions only

Length 426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc86Q9JJ89 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc86Q9JJ89 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc86Q9JJ89 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc86Q9JJ89 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.27■□□□□ 0.68
Ccdc86Q9JJ89 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.27■□□□□ 0.68
Ccdc86Q9JJ89 Gm10033-202ENSMUST00000211874 928 ntBASIC19.27■□□□□ 0.68
Ccdc86Q9JJ89 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc86Q9JJ89 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc86Q9JJ89 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc86Q9JJ89 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.27■□□□□ 0.67
Ccdc86Q9JJ89 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc86Q9JJ89 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc86Q9JJ89 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.26■□□□□ 0.67
Ccdc86Q9JJ89 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc86Q9JJ89 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc86Q9JJ89 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc86Q9JJ89 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc86Q9JJ89 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc86Q9JJ89 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc86Q9JJ89 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc86Q9JJ89 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc86Q9JJ89 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc86Q9JJ89 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Gm13534-201ENSMUST00000121169 513 ntBASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.24■□□□□ 0.67
Ccdc86Q9JJ89 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc86Q9JJ89 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc86Q9JJ89 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc86Q9JJ89 Gm26571-201ENSMUST00000181399 666 ntBASIC19.23■□□□□ 0.67
Ccdc86Q9JJ89 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc86Q9JJ89 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc86Q9JJ89 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc86Q9JJ89 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc86Q9JJ89 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc86Q9JJ89 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc86Q9JJ89 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc86Q9JJ89 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc86Q9JJ89 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc86Q9JJ89 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Ccdc86Q9JJ89 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc86Q9JJ89 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms