Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zc3h8Q9JJ48 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Gm10602-201ENSMUST00000098239 609 ntBASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zc3h8Q9JJ48 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.44■□□□□ 0.38
Zc3h8Q9JJ48 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h8Q9JJ48 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h8Q9JJ48 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Zc3h8Q9JJ48 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h8Q9JJ48 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.44■□□□□ 0.38
Zc3h8Q9JJ48 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h8Q9JJ48 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h8Q9JJ48 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h8Q9JJ48 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 Gm6365-201ENSMUST00000054711 744 ntBASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h8Q9JJ48 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h8Q9JJ48 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h8Q9JJ48 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h8Q9JJ48 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h8Q9JJ48 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h8Q9JJ48 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h8Q9JJ48 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h8Q9JJ48 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h8Q9JJ48 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Zc3h8Q9JJ48 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h8Q9JJ48 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h8Q9JJ48 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Zc3h8Q9JJ48 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h8Q9JJ48 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Zc3h8Q9JJ48 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Zc3h8Q9JJ48 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Zc3h8Q9JJ48 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Zc3h8Q9JJ48 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zc3h8Q9JJ48 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zc3h8Q9JJ48 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Zc3h8Q9JJ48 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Zc3h8Q9JJ48 Gm6211-202ENSMUST00000167849 925 ntBASIC17.39■□□□□ 0.37
Zc3h8Q9JJ48 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.39■□□□□ 0.37
Zc3h8Q9JJ48 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.39■□□□□ 0.37
Zc3h8Q9JJ48 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zc3h8Q9JJ48 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Zc3h8Q9JJ48 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.39■□□□□ 0.37
Zc3h8Q9JJ48 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Zc3h8Q9JJ48 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms