Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tubb3Q9ERD7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tubb3Q9ERD7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.7■□□□□ 0.58
Tubb3Q9ERD7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tubb3Q9ERD7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Tubb3Q9ERD7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Tubb3Q9ERD7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tubb3Q9ERD7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tubb3Q9ERD7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.69■□□□□ 0.58
Tubb3Q9ERD7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tubb3Q9ERD7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.68■□□□□ 0.58
Tubb3Q9ERD7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.68■□□□□ 0.58
Tubb3Q9ERD7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tubb3Q9ERD7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tubb3Q9ERD7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tubb3Q9ERD7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tubb3Q9ERD7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Tubb3Q9ERD7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tubb3Q9ERD7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.68■□□□□ 0.58
Tubb3Q9ERD7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tubb3Q9ERD7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tubb3Q9ERD7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tubb3Q9ERD7 Gm42569-201ENSMUST00000200539 472 ntBASIC18.67■□□□□ 0.58
Tubb3Q9ERD7 Gm42642-201ENSMUST00000200683 355 ntBASIC18.67■□□□□ 0.58
Tubb3Q9ERD7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tubb3Q9ERD7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tubb3Q9ERD7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.67■□□□□ 0.58
Tubb3Q9ERD7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tubb3Q9ERD7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tubb3Q9ERD7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tubb3Q9ERD7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Tubb3Q9ERD7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tubb3Q9ERD7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tubb3Q9ERD7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tubb3Q9ERD7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Tubb3Q9ERD7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.66■□□□□ 0.58
Tubb3Q9ERD7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tubb3Q9ERD7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tubb3Q9ERD7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tubb3Q9ERD7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tubb3Q9ERD7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tubb3Q9ERD7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tubb3Q9ERD7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tubb3Q9ERD7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Tubb3Q9ERD7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tubb3Q9ERD7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tubb3Q9ERD7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tubb3Q9ERD7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tubb3Q9ERD7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tubb3Q9ERD7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tubb3Q9ERD7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tubb3Q9ERD7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tubb3Q9ERD7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Tubb3Q9ERD7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.64■□□□□ 0.57
Tubb3Q9ERD7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tubb3Q9ERD7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.64■□□□□ 0.57
Tubb3Q9ERD7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Tubb3Q9ERD7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tubb3Q9ERD7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tubb3Q9ERD7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tubb3Q9ERD7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Gm26571-201ENSMUST00000181399 666 ntBASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Gm18671-201ENSMUST00000214826 683 ntBASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tubb3Q9ERD7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms