Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Gm42642-201ENSMUST00000200683 355 ntBASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nif3l1Q9EQ80 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nif3l1Q9EQ80 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nif3l1Q9EQ80 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nif3l1Q9EQ80 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.67■□□□□ 0.58
Nif3l1Q9EQ80 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.67■□□□□ 0.58
Nif3l1Q9EQ80 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Nif3l1Q9EQ80 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nif3l1Q9EQ80 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nif3l1Q9EQ80 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nif3l1Q9EQ80 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nif3l1Q9EQ80 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nif3l1Q9EQ80 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nif3l1Q9EQ80 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nif3l1Q9EQ80 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nif3l1Q9EQ80 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nif3l1Q9EQ80 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nif3l1Q9EQ80 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nif3l1Q9EQ80 Gm10033-202ENSMUST00000211874 928 ntBASIC18.66■□□□□ 0.58
Nif3l1Q9EQ80 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nif3l1Q9EQ80 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nif3l1Q9EQ80 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nif3l1Q9EQ80 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Nif3l1Q9EQ80 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Gm8495-201ENSMUST00000188740 694 ntBASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nif3l1Q9EQ80 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Nif3l1Q9EQ80 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Gm13534-201ENSMUST00000121169 513 ntBASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nif3l1Q9EQ80 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nif3l1Q9EQ80 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Nif3l1Q9EQ80 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Nif3l1Q9EQ80 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nif3l1Q9EQ80 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nif3l1Q9EQ80 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
Nif3l1Q9EQ80 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nif3l1Q9EQ80 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms