Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chchd1Q9CQA6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chchd1Q9CQA6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chchd1Q9CQA6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chchd1Q9CQA6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chchd1Q9CQA6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.27□□□□□ -0.12
Chchd1Q9CQA6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chchd1Q9CQA6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chchd1Q9CQA6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.27□□□□□ -0.12
Chchd1Q9CQA6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chchd1Q9CQA6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.27□□□□□ -0.12
Chchd1Q9CQA6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chchd1Q9CQA6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.27□□□□□ -0.12
Chchd1Q9CQA6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.27□□□□□ -0.13
Chchd1Q9CQA6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chchd1Q9CQA6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Chchd1Q9CQA6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chchd1Q9CQA6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chchd1Q9CQA6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Chchd1Q9CQA6 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.27□□□□□ -0.13
Chchd1Q9CQA6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chchd1Q9CQA6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chchd1Q9CQA6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chchd1Q9CQA6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chchd1Q9CQA6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chchd1Q9CQA6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chchd1Q9CQA6 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Chchd1Q9CQA6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms