Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 Gm18671-201ENSMUST00000214826 683 ntBASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rpa3Q9CQ71 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Gm13146-201ENSMUST00000118508 780 ntBASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Gm42642-201ENSMUST00000200683 355 ntBASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.84■□□□□ 0.77
Rpa3Q9CQ71 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpa3Q9CQ71 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpa3Q9CQ71 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rpa3Q9CQ71 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpa3Q9CQ71 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Rpa3Q9CQ71 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
Rpa3Q9CQ71 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpa3Q9CQ71 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rpa3Q9CQ71 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rpa3Q9CQ71 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Rpa3Q9CQ71 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.83■□□□□ 0.77
Rpa3Q9CQ71 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpa3Q9CQ71 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpa3Q9CQ71 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpa3Q9CQ71 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.83■□□□□ 0.76
Rpa3Q9CQ71 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpa3Q9CQ71 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa3Q9CQ71 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa3Q9CQ71 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa3Q9CQ71 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa3Q9CQ71 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa3Q9CQ71 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa3Q9CQ71 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Rpa3Q9CQ71 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa3Q9CQ71 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpa3Q9CQ71 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa3Q9CQ71 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rpa3Q9CQ71 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa3Q9CQ71 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa3Q9CQ71 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa3Q9CQ71 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rpa3Q9CQ71 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa3Q9CQ71 Gm8495-201ENSMUST00000188740 694 ntBASIC19.81■□□□□ 0.76
Rpa3Q9CQ71 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.81■□□□□ 0.76
Rpa3Q9CQ71 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa3Q9CQ71 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpa3Q9CQ71 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rpa3Q9CQ71 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Gm10033-202ENSMUST00000211874 928 ntBASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpa3Q9CQ71 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa3Q9CQ71 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa3Q9CQ71 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa3Q9CQ71 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa3Q9CQ71 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa3Q9CQ71 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Rpa3Q9CQ71 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa3Q9CQ71 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa3Q9CQ71 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa3Q9CQ71 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa3Q9CQ71 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa3Q9CQ71 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpa3Q9CQ71 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rpa3Q9CQ71 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpa3Q9CQ71 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpa3Q9CQ71 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rpa3Q9CQ71 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms