Protein–RNA interactions for Protein: Q925H1

Trps1, Zinc finger transcription factor Trps1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1Q925H1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trps1Q925H1 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.56■□□□□ 0.72
Trps1Q925H1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trps1Q925H1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trps1Q925H1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trps1Q925H1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trps1Q925H1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trps1Q925H1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.55■□□□□ 0.72
Trps1Q925H1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trps1Q925H1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trps1Q925H1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trps1Q925H1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trps1Q925H1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.55■□□□□ 0.72
Trps1Q925H1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Trps1Q925H1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trps1Q925H1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trps1Q925H1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
Trps1Q925H1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trps1Q925H1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.55■□□□□ 0.72
Trps1Q925H1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trps1Q925H1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trps1Q925H1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trps1Q925H1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trps1Q925H1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trps1Q925H1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trps1Q925H1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trps1Q925H1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trps1Q925H1 Gm13534-201ENSMUST00000121169 513 ntBASIC19.53■□□□□ 0.72
Trps1Q925H1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.53■□□□□ 0.72
Trps1Q925H1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.53■□□□□ 0.72
Trps1Q925H1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.53■□□□□ 0.72
Trps1Q925H1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trps1Q925H1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.53■□□□□ 0.72
Trps1Q925H1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.53■□□□□ 0.72
Trps1Q925H1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trps1Q925H1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trps1Q925H1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trps1Q925H1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trps1Q925H1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trps1Q925H1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trps1Q925H1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trps1Q925H1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Trps1Q925H1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Trps1Q925H1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.52■□□□□ 0.71
Trps1Q925H1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trps1Q925H1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trps1Q925H1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.52■□□□□ 0.71
Trps1Q925H1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trps1Q925H1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trps1Q925H1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trps1Q925H1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Trps1Q925H1 Gm42778-201ENSMUST00000199644 553 ntBASIC19.51■□□□□ 0.71
Trps1Q925H1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.51■□□□□ 0.71
Trps1Q925H1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trps1Q925H1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trps1Q925H1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trps1Q925H1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trps1Q925H1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trps1Q925H1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trps1Q925H1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trps1Q925H1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trps1Q925H1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trps1Q925H1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trps1Q925H1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.5■□□□□ 0.71
Trps1Q925H1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trps1Q925H1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trps1Q925H1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.5■□□□□ 0.71
Trps1Q925H1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trps1Q925H1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trps1Q925H1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms