Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb5Q91XX5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb5Q91XX5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdhgb5Q91XX5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhgb5Q91XX5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhgb5Q91XX5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb5Q91XX5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb5Q91XX5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdhgb5Q91XX5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhgb5Q91XX5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhgb5Q91XX5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Gm2559-201ENSMUST00000201323 363 ntBASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhgb5Q91XX5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb5Q91XX5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb5Q91XX5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb5Q91XX5 Gm12896-201ENSMUST00000118430 226 ntBASIC18.65■□□□□ 0.58
Pcdhgb5Q91XX5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdhgb5Q91XX5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb5Q91XX5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhgb5Q91XX5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb5Q91XX5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgb5Q91XX5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Pcdhgb5Q91XX5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb5Q91XX5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhgb5Q91XX5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhgb5Q91XX5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhgb5Q91XX5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb5Q91XX5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb5Q91XX5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb5Q91XX5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb5Q91XX5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhgb5Q91XX5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgb5Q91XX5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb5Q91XX5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb5Q91XX5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb5Q91XX5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb5Q91XX5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb5Q91XX5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb5Q91XX5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb5Q91XX5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb5Q91XX5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb5Q91XX5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgb5Q91XX5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhgb5Q91XX5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhgb5Q91XX5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdhgb5Q91XX5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhgb5Q91XX5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb5Q91XX5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb5Q91XX5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.62■□□□□ 0.57
Pcdhgb5Q91XX5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb5Q91XX5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb5Q91XX5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgb5Q91XX5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgb5Q91XX5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms