Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm2559-201ENSMUST00000201323 363 ntBASIC18.63■□□□□ 0.57
Vsx1Q91V10 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.63■□□□□ 0.57
Vsx1Q91V10 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.63■□□□□ 0.57
Vsx1Q91V10 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.63■□□□□ 0.57
Vsx1Q91V10 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx1Q91V10 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx1Q91V10 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.63■□□□□ 0.57
Vsx1Q91V10 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx1Q91V10 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx1Q91V10 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx1Q91V10 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx1Q91V10 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx1Q91V10 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Vsx1Q91V10 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vsx1Q91V10 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx1Q91V10 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx1Q91V10 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Vsx1Q91V10 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx1Q91V10 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Vsx1Q91V10 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx1Q91V10 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx1Q91V10 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx1Q91V10 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx1Q91V10 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Vsx1Q91V10 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx1Q91V10 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx1Q91V10 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx1Q91V10 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Vsx1Q91V10 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx1Q91V10 Dio3-201ENSMUST00000097228 1449 ntBASIC18.61■□□□□ 0.57
Vsx1Q91V10 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx1Q91V10 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.61■□□□□ 0.57
Vsx1Q91V10 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.61■□□□□ 0.57
Vsx1Q91V10 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx1Q91V10 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx1Q91V10 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx1Q91V10 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx1Q91V10 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx1Q91V10 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx1Q91V10 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx1Q91V10 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx1Q91V10 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Vsx1Q91V10 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx1Q91V10 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx1Q91V10 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx1Q91V10 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx1Q91V10 Gm9987-201ENSMUST00000069768 567 ntBASIC18.6■□□□□ 0.57
Vsx1Q91V10 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx1Q91V10 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Vsx1Q91V10 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.6■□□□□ 0.57
Vsx1Q91V10 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Vsx1Q91V10 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vsx1Q91V10 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vsx1Q91V10 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vsx1Q91V10 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.59■□□□□ 0.57
Vsx1Q91V10 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vsx1Q91V10 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vsx1Q91V10 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vsx1Q91V10 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vsx1Q91V10 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vsx1Q91V10 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vsx1Q91V10 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.58■□□□□ 0.57
Vsx1Q91V10 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vsx1Q91V10 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vsx1Q91V10 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vsx1Q91V10 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vsx1Q91V10 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vsx1Q91V10 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Vsx1Q91V10 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.58■□□□□ 0.56
Vsx1Q91V10 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.58■□□□□ 0.56
Vsx1Q91V10 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Vsx1Q91V10 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.58■□□□□ 0.56
Vsx1Q91V10 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Vsx1Q91V10 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.58■□□□□ 0.56
Vsx1Q91V10 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vsx1Q91V10 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Vsx1Q91V10 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vsx1Q91V10 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.58■□□□□ 0.56
Vsx1Q91V10 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vsx1Q91V10 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.58■□□□□ 0.56
Vsx1Q91V10 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vsx1Q91V10 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vsx1Q91V10 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vsx1Q91V10 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vsx1Q91V10 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
Vsx1Q91V10 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Vsx1Q91V10 Gm7860-201ENSMUST00000121190 879 ntBASIC18.57■□□□□ 0.56
Vsx1Q91V10 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.57■□□□□ 0.56
Vsx1Q91V10 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vsx1Q91V10 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Vsx1Q91V10 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vsx1Q91V10 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vsx1Q91V10 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vsx1Q91V10 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vsx1Q91V10 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vsx1Q91V10 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms