Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TraipQ8VIG6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TraipQ8VIG6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.08■□□□□ 0.81
TraipQ8VIG6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.08■□□□□ 0.81
TraipQ8VIG6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TraipQ8VIG6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
TraipQ8VIG6 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.07■□□□□ 0.8
TraipQ8VIG6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TraipQ8VIG6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TraipQ8VIG6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.07■□□□□ 0.8
TraipQ8VIG6 Gm22240-201ENSMUST00000175225 82 ntBASIC20.07■□□□□ 0.8
TraipQ8VIG6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.07■□□□□ 0.8
TraipQ8VIG6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TraipQ8VIG6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TraipQ8VIG6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TraipQ8VIG6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TraipQ8VIG6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TraipQ8VIG6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TraipQ8VIG6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Gm44549-201ENSMUST00000208351 577 ntBASIC20.06■□□□□ 0.8
TraipQ8VIG6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TraipQ8VIG6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TraipQ8VIG6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TraipQ8VIG6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.05■□□□□ 0.8
TraipQ8VIG6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TraipQ8VIG6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TraipQ8VIG6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TraipQ8VIG6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TraipQ8VIG6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TraipQ8VIG6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TraipQ8VIG6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
TraipQ8VIG6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TraipQ8VIG6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TraipQ8VIG6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TraipQ8VIG6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TraipQ8VIG6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TraipQ8VIG6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TraipQ8VIG6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TraipQ8VIG6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TraipQ8VIG6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TraipQ8VIG6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TraipQ8VIG6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TraipQ8VIG6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TraipQ8VIG6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
TraipQ8VIG6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TraipQ8VIG6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.03■□□□□ 0.8
TraipQ8VIG6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TraipQ8VIG6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TraipQ8VIG6 Dio3-201ENSMUST00000097228 1449 ntBASIC20.02■□□□□ 0.8
TraipQ8VIG6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TraipQ8VIG6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.02■□□□□ 0.8
TraipQ8VIG6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TraipQ8VIG6 Trmt13-210ENSMUST00000198454 880 ntBASIC20.02■□□□□ 0.8
TraipQ8VIG6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TraipQ8VIG6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TraipQ8VIG6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TraipQ8VIG6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TraipQ8VIG6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TraipQ8VIG6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TraipQ8VIG6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TraipQ8VIG6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TraipQ8VIG6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
TraipQ8VIG6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TraipQ8VIG6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TraipQ8VIG6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.01■□□□□ 0.79
TraipQ8VIG6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.01■□□□□ 0.79
TraipQ8VIG6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TraipQ8VIG6 Gm2559-201ENSMUST00000201323 363 ntBASIC20.01■□□□□ 0.79
TraipQ8VIG6 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.01■□□□□ 0.79
TraipQ8VIG6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TraipQ8VIG6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TraipQ8VIG6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TraipQ8VIG6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TraipQ8VIG6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TraipQ8VIG6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TraipQ8VIG6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
TraipQ8VIG6 Gm10167-201ENSMUST00000150411 1479 ntBASIC20■□□□□ 0.79
TraipQ8VIG6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TraipQ8VIG6 Gm13168-201ENSMUST00000121771 632 ntBASIC20■□□□□ 0.79
TraipQ8VIG6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TraipQ8VIG6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20■□□□□ 0.79
TraipQ8VIG6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TraipQ8VIG6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TraipQ8VIG6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TraipQ8VIG6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20■□□□□ 0.79
TraipQ8VIG6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20■□□□□ 0.79
TraipQ8VIG6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TraipQ8VIG6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms