Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna3Q8R4G9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna3Q8R4G9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Chrna3Q8R4G9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna3Q8R4G9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna3Q8R4G9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna3Q8R4G9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna3Q8R4G9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chrna3Q8R4G9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Chrna3Q8R4G9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 Gm6365-201ENSMUST00000054711 744 ntBASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Chrna3Q8R4G9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Mir5133-201ENSMUST00000174955 77 ntBASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Chrna3Q8R4G9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chrna3Q8R4G9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Gm7290-201ENSMUST00000104990 617 ntBASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Gm12918-201ENSMUST00000120234 636 ntBASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Gm15710-201ENSMUST00000121821 636 ntBASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Gm5075-201ENSMUST00000196916 622 ntBASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chrna3Q8R4G9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms