Protein–RNA interactions for Protein: Q8R3B7

Brd8, Bromodomain-containing protein 8, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd8Q8R3B7 Gm12933-201ENSMUST00000120203 872 ntBASIC19.19■□□□□ 0.66
Brd8Q8R3B7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Brd8Q8R3B7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.19■□□□□ 0.66
Brd8Q8R3B7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.19■□□□□ 0.66
Brd8Q8R3B7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Brd8Q8R3B7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brd8Q8R3B7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brd8Q8R3B7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Brd8Q8R3B7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Gm7290-201ENSMUST00000104990 617 ntBASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Gm12918-201ENSMUST00000120234 636 ntBASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Gm15710-201ENSMUST00000121821 636 ntBASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Gm5075-201ENSMUST00000196916 622 ntBASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brd8Q8R3B7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Brd8Q8R3B7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brd8Q8R3B7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Nespas-201ENSMUST00000143738 1083 ntBASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Brd8Q8R3B7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Brd8Q8R3B7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brd8Q8R3B7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.15■□□□□ 0.66
Brd8Q8R3B7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Brd8Q8R3B7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.15■□□□□ 0.66
Brd8Q8R3B7 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.15■□□□□ 0.66
Brd8Q8R3B7 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.15■□□□□ 0.66
Brd8Q8R3B7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brd8Q8R3B7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Brd8Q8R3B7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Brd8Q8R3B7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Brd8Q8R3B7 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.15■□□□□ 0.66
Brd8Q8R3B7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Brd8Q8R3B7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Brd8Q8R3B7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Brd8Q8R3B7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Brd8Q8R3B7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Brd8Q8R3B7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brd8Q8R3B7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Brd8Q8R3B7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Brd8Q8R3B7 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.14■□□□□ 0.65
Brd8Q8R3B7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Brd8Q8R3B7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Brd8Q8R3B7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.14■□□□□ 0.65
Brd8Q8R3B7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brd8Q8R3B7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brd8Q8R3B7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brd8Q8R3B7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.14■□□□□ 0.65
Brd8Q8R3B7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Brd8Q8R3B7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Brd8Q8R3B7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Brd8Q8R3B7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Brd8Q8R3B7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Brd8Q8R3B7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Brd8Q8R3B7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Brd8Q8R3B7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Brd8Q8R3B7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Brd8Q8R3B7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.12■□□□□ 0.65
Brd8Q8R3B7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Brd8Q8R3B7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Brd8Q8R3B7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Brd8Q8R3B7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Brd8Q8R3B7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms