Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Gm12933-201ENSMUST00000120203 872 ntBASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Mir5133-201ENSMUST00000174955 77 ntBASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lin28aQ8K3Y3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Lin28aQ8K3Y3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lin28aQ8K3Y3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lin28aQ8K3Y3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lin28aQ8K3Y3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lin28aQ8K3Y3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lin28aQ8K3Y3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lin28aQ8K3Y3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lin28aQ8K3Y3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lin28aQ8K3Y3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lin28aQ8K3Y3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lin28aQ8K3Y3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lin28aQ8K3Y3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lin28aQ8K3Y3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Lin28aQ8K3Y3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Lin28aQ8K3Y3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lin28aQ8K3Y3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lin28aQ8K3Y3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lin28aQ8K3Y3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Lin28aQ8K3Y3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lin28aQ8K3Y3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lin28aQ8K3Y3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lin28aQ8K3Y3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lin28aQ8K3Y3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lin28aQ8K3Y3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lin28aQ8K3Y3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lin28aQ8K3Y3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.52■□□□□ 0.4
Lin28aQ8K3Y3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lin28aQ8K3Y3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lin28aQ8K3Y3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.52■□□□□ 0.4
Lin28aQ8K3Y3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lin28aQ8K3Y3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.52■□□□□ 0.4
Lin28aQ8K3Y3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lin28aQ8K3Y3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Lin28aQ8K3Y3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lin28aQ8K3Y3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lin28aQ8K3Y3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Gm13148-201ENSMUST00000118892 745 ntBASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Lin28aQ8K3Y3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms