Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist3h2bbQ8CGP0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hist3h2bbQ8CGP0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist3h2bbQ8CGP0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist3h2bbQ8CGP0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.36□□□□□ -0.11
Hist3h2bbQ8CGP0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hist3h2bbQ8CGP0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hist3h2bbQ8CGP0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hist3h2bbQ8CGP0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hist3h2bbQ8CGP0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hist3h2bbQ8CGP0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Hist3h2bbQ8CGP0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hist3h2bbQ8CGP0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hist3h2bbQ8CGP0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hist3h2bbQ8CGP0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hist3h2bbQ8CGP0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Haglr-201ENSMUST00000100000 2085 ntBASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hist3h2bbQ8CGP0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hist3h2bbQ8CGP0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hist3h2bbQ8CGP0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hist3h2bbQ8CGP0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hist3h2bbQ8CGP0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hist3h2bbQ8CGP0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hist3h2bbQ8CGP0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hist3h2bbQ8CGP0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hist3h2bbQ8CGP0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hist3h2bbQ8CGP0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hist3h2bbQ8CGP0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hist3h2bbQ8CGP0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hist3h2bbQ8CGP0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Hist3h2bbQ8CGP0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist3h2bbQ8CGP0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist3h2bbQ8CGP0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist3h2bbQ8CGP0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist3h2bbQ8CGP0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hist3h2bbQ8CGP0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist3h2bbQ8CGP0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist3h2bbQ8CGP0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hist3h2bbQ8CGP0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms