Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Lin9Q8C735 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lin9Q8C735 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lin9Q8C735 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.52■□□□□ 0.88
Lin9Q8C735 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lin9Q8C735 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lin9Q8C735 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lin9Q8C735 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.52■□□□□ 0.88
Lin9Q8C735 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lin9Q8C735 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Lin9Q8C735 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Lin9Q8C735 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.52■□□□□ 0.87
Lin9Q8C735 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lin9Q8C735 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lin9Q8C735 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lin9Q8C735 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.51■□□□□ 0.87
Lin9Q8C735 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lin9Q8C735 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Lin9Q8C735 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.51■□□□□ 0.87
Lin9Q8C735 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.51■□□□□ 0.87
Lin9Q8C735 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lin9Q8C735 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lin9Q8C735 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lin9Q8C735 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Lin9Q8C735 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lin9Q8C735 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Lin9Q8C735 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Lin9Q8C735 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lin9Q8C735 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Lin9Q8C735 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Lin9Q8C735 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.5■□□□□ 0.87
Lin9Q8C735 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lin9Q8C735 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lin9Q8C735 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lin9Q8C735 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lin9Q8C735 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.5■□□□□ 0.87
Lin9Q8C735 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lin9Q8C735 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lin9Q8C735 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Lin9Q8C735 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lin9Q8C735 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lin9Q8C735 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lin9Q8C735 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lin9Q8C735 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lin9Q8C735 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.49■□□□□ 0.87
Lin9Q8C735 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lin9Q8C735 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lin9Q8C735 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lin9Q8C735 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lin9Q8C735 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lin9Q8C735 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Lin9Q8C735 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lin9Q8C735 Gm12933-201ENSMUST00000120203 872 ntBASIC20.48■□□□□ 0.87
Lin9Q8C735 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.48■□□□□ 0.87
Lin9Q8C735 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin9Q8C735 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Lin9Q8C735 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Lin9Q8C735 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin9Q8C735 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Lin9Q8C735 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin9Q8C735 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin9Q8C735 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin9Q8C735 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin9Q8C735 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Lin9Q8C735 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin9Q8C735 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin9Q8C735 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lin9Q8C735 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Lin9Q8C735 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lin9Q8C735 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lin9Q8C735 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lin9Q8C735 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lin9Q8C735 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lin9Q8C735 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lin9Q8C735 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lin9Q8C735 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lin9Q8C735 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Lin9Q8C735 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin9Q8C735 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin9Q8C735 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.46■□□□□ 0.87
Lin9Q8C735 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.46■□□□□ 0.87
Lin9Q8C735 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin9Q8C735 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin9Q8C735 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lin9Q8C735 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin9Q8C735 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin9Q8C735 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.46■□□□□ 0.87
Lin9Q8C735 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin9Q8C735 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lin9Q8C735 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Lin9Q8C735 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lin9Q8C735 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lin9Q8C735 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lin9Q8C735 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lin9Q8C735 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.45■□□□□ 0.86
Lin9Q8C735 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lin9Q8C735 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lin9Q8C735 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lin9Q8C735 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lin9Q8C735 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms