Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ska3Q8C263 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ska3Q8C263 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ska3Q8C263 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ska3Q8C263 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ska3Q8C263 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ska3Q8C263 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ska3Q8C263 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ska3Q8C263 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ska3Q8C263 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ska3Q8C263 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ska3Q8C263 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ska3Q8C263 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ska3Q8C263 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ska3Q8C263 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ska3Q8C263 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.64■□□□□ 0.41
Ska3Q8C263 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Ska3Q8C263 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ska3Q8C263 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ska3Q8C263 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ska3Q8C263 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ska3Q8C263 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Ska3Q8C263 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ska3Q8C263 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ska3Q8C263 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ska3Q8C263 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Ska3Q8C263 Gm10849-201ENSMUST00000100397 618 ntBASIC17.63■□□□□ 0.41
Ska3Q8C263 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.63■□□□□ 0.41
Ska3Q8C263 AV356131-201ENSMUST00000206201 750 ntBASIC17.63■□□□□ 0.41
Ska3Q8C263 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.63■□□□□ 0.41
Ska3Q8C263 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ska3Q8C263 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ska3Q8C263 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ska3Q8C263 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ska3Q8C263 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska3Q8C263 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ska3Q8C263 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska3Q8C263 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska3Q8C263 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska3Q8C263 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ska3Q8C263 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska3Q8C263 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska3Q8C263 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska3Q8C263 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ska3Q8C263 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska3Q8C263 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ska3Q8C263 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ska3Q8C263 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ska3Q8C263 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska3Q8C263 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.61■□□□□ 0.41
Ska3Q8C263 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.61■□□□□ 0.41
Ska3Q8C263 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.61■□□□□ 0.41
Ska3Q8C263 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska3Q8C263 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.61■□□□□ 0.41
Ska3Q8C263 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska3Q8C263 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska3Q8C263 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska3Q8C263 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska3Q8C263 Gm13534-201ENSMUST00000121169 513 ntBASIC17.6■□□□□ 0.41
Ska3Q8C263 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ska3Q8C263 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ska3Q8C263 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska3Q8C263 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska3Q8C263 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska3Q8C263 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska3Q8C263 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska3Q8C263 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska3Q8C263 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska3Q8C263 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska3Q8C263 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska3Q8C263 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Ska3Q8C263 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska3Q8C263 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Ska3Q8C263 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ska3Q8C263 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska3Q8C263 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ska3Q8C263 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska3Q8C263 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska3Q8C263 Gm26571-201ENSMUST00000181399 666 ntBASIC17.59■□□□□ 0.41
Ska3Q8C263 Gm42569-201ENSMUST00000200539 472 ntBASIC17.59■□□□□ 0.41
Ska3Q8C263 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.59■□□□□ 0.41
Ska3Q8C263 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.59■□□□□ 0.41
Ska3Q8C263 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska3Q8C263 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms