Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.99■□□□□ 0.79
Rd3Q8BRE0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rd3Q8BRE0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rd3Q8BRE0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rd3Q8BRE0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rd3Q8BRE0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rd3Q8BRE0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rd3Q8BRE0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rd3Q8BRE0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rd3Q8BRE0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rd3Q8BRE0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.96■□□□□ 0.79
Rd3Q8BRE0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rd3Q8BRE0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rd3Q8BRE0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rd3Q8BRE0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rd3Q8BRE0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rd3Q8BRE0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rd3Q8BRE0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rd3Q8BRE0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rd3Q8BRE0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.95■□□□□ 0.78
Rd3Q8BRE0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.95■□□□□ 0.78
Rd3Q8BRE0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rd3Q8BRE0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rd3Q8BRE0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rd3Q8BRE0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rd3Q8BRE0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rd3Q8BRE0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rd3Q8BRE0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rd3Q8BRE0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.94■□□□□ 0.78
Rd3Q8BRE0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rd3Q8BRE0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.94■□□□□ 0.78
Rd3Q8BRE0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.94■□□□□ 0.78
Rd3Q8BRE0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Rd3Q8BRE0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rd3Q8BRE0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rd3Q8BRE0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rd3Q8BRE0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rd3Q8BRE0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.93■□□□□ 0.78
Rd3Q8BRE0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rd3Q8BRE0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.93■□□□□ 0.78
Rd3Q8BRE0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.93■□□□□ 0.78
Rd3Q8BRE0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.93■□□□□ 0.78
Rd3Q8BRE0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rd3Q8BRE0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rd3Q8BRE0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rd3Q8BRE0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rd3Q8BRE0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rd3Q8BRE0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rd3Q8BRE0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rd3Q8BRE0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rd3Q8BRE0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rd3Q8BRE0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rd3Q8BRE0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rd3Q8BRE0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rd3Q8BRE0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rd3Q8BRE0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rd3Q8BRE0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rd3Q8BRE0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rd3Q8BRE0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rd3Q8BRE0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rd3Q8BRE0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rd3Q8BRE0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rd3Q8BRE0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rd3Q8BRE0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rd3Q8BRE0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rd3Q8BRE0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.91■□□□□ 0.78
Rd3Q8BRE0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.91■□□□□ 0.78
Rd3Q8BRE0 Gm2559-201ENSMUST00000201323 363 ntBASIC19.91■□□□□ 0.78
Rd3Q8BRE0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.91■□□□□ 0.78
Rd3Q8BRE0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rd3Q8BRE0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rd3Q8BRE0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms