Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip4Q8BQP8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Rab11fip4Q8BQP8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip4Q8BQP8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip4Q8BQP8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.8■□□□□ 0.92
Rab11fip4Q8BQP8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip4Q8BQP8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rab11fip4Q8BQP8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab11fip4Q8BQP8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip4Q8BQP8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip4Q8BQP8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Rab11fip4Q8BQP8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.79■□□□□ 0.92
Rab11fip4Q8BQP8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.79■□□□□ 0.92
Rab11fip4Q8BQP8 Gm10602-201ENSMUST00000098239 609 ntBASIC20.79■□□□□ 0.92
Rab11fip4Q8BQP8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip4Q8BQP8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab11fip4Q8BQP8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab11fip4Q8BQP8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip4Q8BQP8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rab11fip4Q8BQP8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Rab11fip4Q8BQP8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rab11fip4Q8BQP8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip4Q8BQP8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.77■□□□□ 0.92
Rab11fip4Q8BQP8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab11fip4Q8BQP8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rab11fip4Q8BQP8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rab11fip4Q8BQP8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip4Q8BQP8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip4Q8BQP8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip4Q8BQP8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip4Q8BQP8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip4Q8BQP8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip4Q8BQP8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Rab11fip4Q8BQP8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab11fip4Q8BQP8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rab11fip4Q8BQP8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip4Q8BQP8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip4Q8BQP8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip4Q8BQP8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.75■□□□□ 0.91
Rab11fip4Q8BQP8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip4Q8BQP8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab11fip4Q8BQP8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Rab11fip4Q8BQP8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rab11fip4Q8BQP8 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.73■□□□□ 0.91
Rab11fip4Q8BQP8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip4Q8BQP8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip4Q8BQP8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip4Q8BQP8 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.73■□□□□ 0.91
Rab11fip4Q8BQP8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip4Q8BQP8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.73■□□□□ 0.91
Rab11fip4Q8BQP8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.73■□□□□ 0.91
Rab11fip4Q8BQP8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rab11fip4Q8BQP8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rab11fip4Q8BQP8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip4Q8BQP8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip4Q8BQP8 Gm12933-201ENSMUST00000120203 872 ntBASIC20.72■□□□□ 0.91
Rab11fip4Q8BQP8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip4Q8BQP8 Gm7514-201ENSMUST00000209475 934 ntBASIC20.72■□□□□ 0.91
Rab11fip4Q8BQP8 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.72■□□□□ 0.91
Rab11fip4Q8BQP8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab11fip4Q8BQP8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms