Protein–RNA interactions for Protein: Q8BP97

Rhbdd3, Rhomboid domain-containing protein 3, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdd3Q8BP97 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdd3Q8BP97 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rhbdd3Q8BP97 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.22■□□□□ 0.35
Rhbdd3Q8BP97 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdd3Q8BP97 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdd3Q8BP97 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rhbdd3Q8BP97 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.21■□□□□ 0.35
Rhbdd3Q8BP97 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.21■□□□□ 0.34
Rhbdd3Q8BP97 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rhbdd3Q8BP97 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Smad6-203ENSMUST00000179458 273 ntBASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Rhbdd3Q8BP97 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Gm27454-201ENSMUST00000185090 204 ntBASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Gm8493-201ENSMUST00000196881 489 ntBASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rhbdd3Q8BP97 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Gm43173-201ENSMUST00000202246 593 ntBASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rhbdd3Q8BP97 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rhbdd3Q8BP97 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rhbdd3Q8BP97 Gm11421-201ENSMUST00000122124 294 ntBASIC17.17■□□□□ 0.34
Rhbdd3Q8BP97 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rhbdd3Q8BP97 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rhbdd3Q8BP97 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.17■□□□□ 0.34
Rhbdd3Q8BP97 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rhbdd3Q8BP97 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rhbdd3Q8BP97 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.16■□□□□ 0.34
Rhbdd3Q8BP97 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rhbdd3Q8BP97 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rhbdd3Q8BP97 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rhbdd3Q8BP97 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rhbdd3Q8BP97 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.16■□□□□ 0.34
Rhbdd3Q8BP97 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.16■□□□□ 0.34
Rhbdd3Q8BP97 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Rhbdd3Q8BP97 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rhbdd3Q8BP97 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rhbdd3Q8BP97 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rhbdd3Q8BP97 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rhbdd3Q8BP97 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms