Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Depdc1bQ8BH88 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 AV356131-201ENSMUST00000206201 750 ntBASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Depdc1bQ8BH88 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Depdc1bQ8BH88 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Depdc1bQ8BH88 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Depdc1bQ8BH88 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.4■□□□□ 0.86
Depdc1bQ8BH88 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Depdc1bQ8BH88 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Depdc1bQ8BH88 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Depdc1bQ8BH88 Golph3-205ENSMUST00000228671 2842 ntBASIC20.4■□□□□ 0.86
Depdc1bQ8BH88 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Depdc1bQ8BH88 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Depdc1bQ8BH88 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Depdc1bQ8BH88 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.86
Depdc1bQ8BH88 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.39■□□□□ 0.86
Depdc1bQ8BH88 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Depdc1bQ8BH88 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Depdc1bQ8BH88 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Depdc1bQ8BH88 Gm27801-201ENSMUST00000184174 223 ntBASIC20.39■□□□□ 0.85
Depdc1bQ8BH88 Gm37179-201ENSMUST00000194862 823 ntBASIC20.39■□□□□ 0.85
Depdc1bQ8BH88 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Depdc1bQ8BH88 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Depdc1bQ8BH88 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Depdc1bQ8BH88 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Depdc1bQ8BH88 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Depdc1bQ8BH88 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
Depdc1bQ8BH88 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Depdc1bQ8BH88 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Depdc1bQ8BH88 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Depdc1bQ8BH88 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Depdc1bQ8BH88 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Depdc1bQ8BH88 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Depdc1bQ8BH88 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Depdc1bQ8BH88 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Depdc1bQ8BH88 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Depdc1bQ8BH88 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Depdc1bQ8BH88 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms