Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm13146-201ENSMUST00000118508 780 ntBASIC18.49■□□□□ 0.55
Ubp1Q811S7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubp1Q811S7 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.49■□□□□ 0.55
Ubp1Q811S7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ubp1Q811S7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.49■□□□□ 0.55
Ubp1Q811S7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubp1Q811S7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubp1Q811S7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubp1Q811S7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubp1Q811S7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubp1Q811S7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubp1Q811S7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubp1Q811S7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Ubp1Q811S7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.48■□□□□ 0.55
Ubp1Q811S7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ubp1Q811S7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ubp1Q811S7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubp1Q811S7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubp1Q811S7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubp1Q811S7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubp1Q811S7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ubp1Q811S7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubp1Q811S7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubp1Q811S7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubp1Q811S7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.47■□□□□ 0.55
Ubp1Q811S7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ubp1Q811S7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubp1Q811S7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubp1Q811S7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubp1Q811S7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubp1Q811S7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubp1Q811S7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubp1Q811S7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.46■□□□□ 0.55
Ubp1Q811S7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Gm7514-201ENSMUST00000209475 934 ntBASIC18.46■□□□□ 0.55
Ubp1Q811S7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubp1Q811S7 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.46■□□□□ 0.54
Ubp1Q811S7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ubp1Q811S7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ubp1Q811S7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubp1Q811S7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubp1Q811S7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.45■□□□□ 0.54
Ubp1Q811S7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubp1Q811S7 Gm10849-201ENSMUST00000100397 618 ntBASIC18.45■□□□□ 0.54
Ubp1Q811S7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ubp1Q811S7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubp1Q811S7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ubp1Q811S7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.45■□□□□ 0.54
Ubp1Q811S7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.44■□□□□ 0.54
Ubp1Q811S7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Ubp1Q811S7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ubp1Q811S7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubp1Q811S7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.43■□□□□ 0.54
Ubp1Q811S7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubp1Q811S7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubp1Q811S7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.43■□□□□ 0.54
Ubp1Q811S7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Ubp1Q811S7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ubp1Q811S7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Ubp1Q811S7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.43■□□□□ 0.54
Ubp1Q811S7 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.43■□□□□ 0.54
Ubp1Q811S7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ubp1Q811S7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubp1Q811S7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubp1Q811S7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubp1Q811S7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubp1Q811S7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubp1Q811S7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ubp1Q811S7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ubp1Q811S7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ubp1Q811S7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms