Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Exosc3Q7TQK4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Exosc3Q7TQK4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Exosc3Q7TQK4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.3■□□□□ 0.36
Exosc3Q7TQK4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Exosc3Q7TQK4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Exosc3Q7TQK4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Exosc3Q7TQK4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Exosc3Q7TQK4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Exosc3Q7TQK4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Exosc3Q7TQK4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Exosc3Q7TQK4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Exosc3Q7TQK4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Exosc3Q7TQK4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Exosc3Q7TQK4 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.29■□□□□ 0.36
Exosc3Q7TQK4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Exosc3Q7TQK4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Exosc3Q7TQK4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Exosc3Q7TQK4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Exosc3Q7TQK4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Exosc3Q7TQK4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Exosc3Q7TQK4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Exosc3Q7TQK4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Exosc3Q7TQK4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Exosc3Q7TQK4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.27■□□□□ 0.36
Exosc3Q7TQK4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Exosc3Q7TQK4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Exosc3Q7TQK4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Exosc3Q7TQK4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Exosc3Q7TQK4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.27■□□□□ 0.36
Exosc3Q7TQK4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.27■□□□□ 0.35
Exosc3Q7TQK4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Exosc3Q7TQK4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Exosc3Q7TQK4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Exosc3Q7TQK4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Exosc3Q7TQK4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Exosc3Q7TQK4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.27■□□□□ 0.35
Exosc3Q7TQK4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Exosc3Q7TQK4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Exosc3Q7TQK4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Exosc3Q7TQK4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Exosc3Q7TQK4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.25■□□□□ 0.35
Exosc3Q7TQK4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Exosc3Q7TQK4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Exosc3Q7TQK4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Exosc3Q7TQK4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Exosc3Q7TQK4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Exosc3Q7TQK4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Exosc3Q7TQK4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Exosc3Q7TQK4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Gm27405-201ENSMUST00000184201 112 ntBASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Exosc3Q7TQK4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms