Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm8Q6ZWM4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm8Q6ZWM4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm8Q6ZWM4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm8Q6ZWM4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Lsm8Q6ZWM4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.77■□□□□ 0.76
Lsm8Q6ZWM4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Lsm8Q6ZWM4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm8Q6ZWM4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm8Q6ZWM4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm8Q6ZWM4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 Gm13534-201ENSMUST00000121169 513 ntBASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.76■□□□□ 0.75
Lsm8Q6ZWM4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Gm42778-201ENSMUST00000199644 553 ntBASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm8Q6ZWM4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm8Q6ZWM4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm8Q6ZWM4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm8Q6ZWM4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm8Q6ZWM4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm8Q6ZWM4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm8Q6ZWM4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm8Q6ZWM4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm8Q6ZWM4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.73■□□□□ 0.75
Lsm8Q6ZWM4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm8Q6ZWM4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Lsm8Q6ZWM4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm8Q6ZWM4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm8Q6ZWM4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.73■□□□□ 0.75
Lsm8Q6ZWM4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm8Q6ZWM4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm8Q6ZWM4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm8Q6ZWM4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm8Q6ZWM4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm8Q6ZWM4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lsm8Q6ZWM4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsm8Q6ZWM4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms