Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cln3Q61124 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cln3Q61124 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cln3Q61124 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cln3Q61124 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cln3Q61124 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.78■□□□□ 0.92
Cln3Q61124 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cln3Q61124 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cln3Q61124 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cln3Q61124 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cln3Q61124 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.77■□□□□ 0.92
Cln3Q61124 Gm18666-201ENSMUST00000190039 958 ntBASIC20.77■□□□□ 0.92
Cln3Q61124 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cln3Q61124 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Cln3Q61124 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.77■□□□□ 0.92
Cln3Q61124 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cln3Q61124 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cln3Q61124 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cln3Q61124 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cln3Q61124 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.76■□□□□ 0.91
Cln3Q61124 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.76■□□□□ 0.91
Cln3Q61124 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cln3Q61124 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.76■□□□□ 0.91
Cln3Q61124 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cln3Q61124 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cln3Q61124 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cln3Q61124 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.76■□□□□ 0.91
Cln3Q61124 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cln3Q61124 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cln3Q61124 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cln3Q61124 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cln3Q61124 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Cln3Q61124 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cln3Q61124 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cln3Q61124 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cln3Q61124 Gm7977-201ENSMUST00000193787 748 ntBASIC20.75■□□□□ 0.91
Cln3Q61124 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.75■□□□□ 0.91
Cln3Q61124 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Cln3Q61124 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cln3Q61124 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cln3Q61124 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cln3Q61124 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cln3Q61124 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cln3Q61124 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cln3Q61124 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cln3Q61124 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cln3Q61124 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.74■□□□□ 0.91
Cln3Q61124 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.74■□□□□ 0.91
Cln3Q61124 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cln3Q61124 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cln3Q61124 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cln3Q61124 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cln3Q61124 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cln3Q61124 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cln3Q61124 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cln3Q61124 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cln3Q61124 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.73■□□□□ 0.91
Cln3Q61124 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cln3Q61124 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
Cln3Q61124 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cln3Q61124 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cln3Q61124 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cln3Q61124 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cln3Q61124 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cln3Q61124 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cln3Q61124 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cln3Q61124 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cln3Q61124 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.72■□□□□ 0.91
Cln3Q61124 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.72■□□□□ 0.91
Cln3Q61124 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.72■□□□□ 0.91
Cln3Q61124 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cln3Q61124 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cln3Q61124 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cln3Q61124 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cln3Q61124 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cln3Q61124 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cln3Q61124 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cln3Q61124 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cln3Q61124 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.71■□□□□ 0.91
Cln3Q61124 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cln3Q61124 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.71■□□□□ 0.91
Cln3Q61124 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cln3Q61124 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.71■□□□□ 0.91
Cln3Q61124 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cln3Q61124 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cln3Q61124 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cln3Q61124 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cln3Q61124 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cln3Q61124 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cln3Q61124 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cln3Q61124 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cln3Q61124 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cln3Q61124 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.7■□□□□ 0.9
Cln3Q61124 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cln3Q61124 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.7■□□□□ 0.9
Cln3Q61124 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cln3Q61124 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cln3Q61124 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cln3Q61124 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cln3Q61124 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms