Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrcc1Q60596 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrcc1Q60596 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.96■□□□□ 0.47
Xrcc1Q60596 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.96■□□□□ 0.47
Xrcc1Q60596 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrcc1Q60596 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrcc1Q60596 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Xrcc1Q60596 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Xrcc1Q60596 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.96■□□□□ 0.47
Xrcc1Q60596 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Xrcc1Q60596 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Gm6420-201ENSMUST00000193885 723 ntBASIC17.95■□□□□ 0.46
Xrcc1Q60596 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Xrcc1Q60596 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Xrcc1Q60596 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Xrcc1Q60596 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.93■□□□□ 0.46
Xrcc1Q60596 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.93■□□□□ 0.46
Xrcc1Q60596 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Xrcc1Q60596 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Xrcc1Q60596 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Xrcc1Q60596 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Xrcc1Q60596 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.92■□□□□ 0.46
Xrcc1Q60596 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.92■□□□□ 0.46
Xrcc1Q60596 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Xrcc1Q60596 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Xrcc1Q60596 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Xrcc1Q60596 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Xrcc1Q60596 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Xrcc1Q60596 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.92■□□□□ 0.46
Xrcc1Q60596 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Xrcc1Q60596 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Xrcc1Q60596 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Xrcc1Q60596 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Xrcc1Q60596 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Xrcc1Q60596 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Xrcc1Q60596 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Xrcc1Q60596 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Xrcc1Q60596 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Xrcc1Q60596 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Xrcc1Q60596 Nespas-201ENSMUST00000143738 1083 ntBASIC17.91■□□□□ 0.46
Xrcc1Q60596 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Xrcc1Q60596 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.91■□□□□ 0.46
Xrcc1Q60596 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Xrcc1Q60596 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Xrcc1Q60596 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Xrcc1Q60596 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.91■□□□□ 0.46
Xrcc1Q60596 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.9■□□□□ 0.46
Xrcc1Q60596 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Xrcc1Q60596 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms