Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-3Q5R1C3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-3Q5R1C3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.09□□□□□ -0.15
Trav3-3Q5R1C3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-3Q5R1C3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-3Q5R1C3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-3Q5R1C3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-3Q5R1C3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Trav3-3Q5R1C3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.08□□□□□ -0.15
Trav3-3Q5R1C3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav3-3Q5R1C3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-3Q5R1C3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav3-3Q5R1C3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav3-3Q5R1C3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-3Q5R1C3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms