Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smad5P97454 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smad5P97454 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Smad5P97454 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smad5P97454 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smad5P97454 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smad5P97454 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smad5P97454 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smad5P97454 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smad5P97454 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Smad5P97454 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smad5P97454 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smad5P97454 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smad5P97454 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.85■□□□□ 0.45
Smad5P97454 Gm7514-201ENSMUST00000209475 934 ntBASIC17.85■□□□□ 0.45
Smad5P97454 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.85■□□□□ 0.45
Smad5P97454 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Smad5P97454 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smad5P97454 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smad5P97454 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Smad5P97454 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smad5P97454 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smad5P97454 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smad5P97454 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smad5P97454 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smad5P97454 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smad5P97454 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.84■□□□□ 0.45
Smad5P97454 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.84■□□□□ 0.45
Smad5P97454 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smad5P97454 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smad5P97454 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smad5P97454 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smad5P97454 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.84■□□□□ 0.45
Smad5P97454 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.84■□□□□ 0.45
Smad5P97454 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smad5P97454 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smad5P97454 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Smad5P97454 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smad5P97454 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smad5P97454 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smad5P97454 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smad5P97454 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smad5P97454 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Smad5P97454 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smad5P97454 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smad5P97454 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smad5P97454 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smad5P97454 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Smad5P97454 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smad5P97454 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smad5P97454 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.83■□□□□ 0.44
Smad5P97454 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smad5P97454 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smad5P97454 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smad5P97454 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smad5P97454 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smad5P97454 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.82■□□□□ 0.44
Smad5P97454 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smad5P97454 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smad5P97454 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smad5P97454 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smad5P97454 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smad5P97454 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.82■□□□□ 0.44
Smad5P97454 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smad5P97454 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.81■□□□□ 0.44
Smad5P97454 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.81■□□□□ 0.44
Smad5P97454 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.81■□□□□ 0.44
Smad5P97454 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smad5P97454 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smad5P97454 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smad5P97454 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.8■□□□□ 0.44
Smad5P97454 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smad5P97454 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smad5P97454 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smad5P97454 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smad5P97454 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smad5P97454 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smad5P97454 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smad5P97454 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smad5P97454 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smad5P97454 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smad5P97454 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smad5P97454 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smad5P97454 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smad5P97454 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smad5P97454 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smad5P97454 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms