Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps45P97390 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.44■□□□□ 0.7
Vps45P97390 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps45P97390 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps45P97390 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps45P97390 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps45P97390 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps45P97390 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps45P97390 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Vps45P97390 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.43■□□□□ 0.7
Vps45P97390 Reep4-203ENSMUST00000226563 1444 ntBASIC19.43■□□□□ 0.7
Vps45P97390 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps45P97390 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps45P97390 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.43■□□□□ 0.7
Vps45P97390 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.43■□□□□ 0.7
Vps45P97390 Gm10653-202ENSMUST00000139570 835 ntBASIC19.43■□□□□ 0.7
Vps45P97390 Gm7514-201ENSMUST00000209475 934 ntBASIC19.43■□□□□ 0.7
Vps45P97390 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps45P97390 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps45P97390 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps45P97390 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps45P97390 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps45P97390 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps45P97390 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.42■□□□□ 0.7
Vps45P97390 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.42■□□□□ 0.7
Vps45P97390 Mir5133-201ENSMUST00000174955 77 ntBASIC19.42■□□□□ 0.7
Vps45P97390 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps45P97390 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps45P97390 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps45P97390 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps45P97390 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps45P97390 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps45P97390 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps45P97390 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.41■□□□□ 0.7
Vps45P97390 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps45P97390 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps45P97390 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps45P97390 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps45P97390 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps45P97390 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps45P97390 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps45P97390 Gm22240-201ENSMUST00000175225 82 ntBASIC19.41■□□□□ 0.7
Vps45P97390 Gm38205-201ENSMUST00000192243 258 ntBASIC19.41■□□□□ 0.7
Vps45P97390 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.41■□□□□ 0.7
Vps45P97390 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps45P97390 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Vps45P97390 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps45P97390 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps45P97390 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps45P97390 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps45P97390 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps45P97390 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps45P97390 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.4■□□□□ 0.7
Vps45P97390 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps45P97390 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps45P97390 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps45P97390 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Vps45P97390 Gm20760-201ENSMUST00000179197 648 ntBASIC19.4■□□□□ 0.7
Vps45P97390 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps45P97390 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps45P97390 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps45P97390 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps45P97390 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps45P97390 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps45P97390 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vps45P97390 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Vps45P97390 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vps45P97390 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps45P97390 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vps45P97390 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.39■□□□□ 0.69
Vps45P97390 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.39■□□□□ 0.69
Vps45P97390 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps45P97390 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.39■□□□□ 0.69
Vps45P97390 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps45P97390 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.39■□□□□ 0.69
Vps45P97390 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps45P97390 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps45P97390 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps45P97390 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vps45P97390 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps45P97390 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vps45P97390 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps45P97390 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Vps45P97390 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps45P97390 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps45P97390 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps45P97390 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Vps45P97390 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Vps45P97390 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.38■□□□□ 0.69
Vps45P97390 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.38■□□□□ 0.69
Vps45P97390 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.38■□□□□ 0.69
Vps45P97390 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps45P97390 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps45P97390 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps45P97390 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps45P97390 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.37■□□□□ 0.69
Vps45P97390 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps45P97390 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps45P97390 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Vps45P97390 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms