Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.47■□□□□ 0.87
CiitaP79621 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CiitaP79621 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.47■□□□□ 0.87
CiitaP79621 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CiitaP79621 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.47■□□□□ 0.87
CiitaP79621 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CiitaP79621 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CiitaP79621 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
CiitaP79621 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CiitaP79621 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CiitaP79621 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CiitaP79621 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CiitaP79621 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CiitaP79621 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
CiitaP79621 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CiitaP79621 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CiitaP79621 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CiitaP79621 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CiitaP79621 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CiitaP79621 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CiitaP79621 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CiitaP79621 Gm27011-201ENSMUST00000182352 972 ntBASIC20.45■□□□□ 0.86
CiitaP79621 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CiitaP79621 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CiitaP79621 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CiitaP79621 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CiitaP79621 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CiitaP79621 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CiitaP79621 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CiitaP79621 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CiitaP79621 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CiitaP79621 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.44■□□□□ 0.86
CiitaP79621 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CiitaP79621 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.44■□□□□ 0.86
CiitaP79621 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CiitaP79621 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CiitaP79621 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CiitaP79621 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CiitaP79621 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CiitaP79621 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CiitaP79621 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CiitaP79621 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CiitaP79621 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CiitaP79621 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CiitaP79621 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
CiitaP79621 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.43■□□□□ 0.86
CiitaP79621 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CiitaP79621 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CiitaP79621 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CiitaP79621 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CiitaP79621 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CiitaP79621 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CiitaP79621 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.42■□□□□ 0.86
CiitaP79621 Gm5408-201ENSMUST00000197998 747 ntBASIC20.42■□□□□ 0.86
CiitaP79621 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CiitaP79621 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.42■□□□□ 0.86
CiitaP79621 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.42■□□□□ 0.86
CiitaP79621 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CiitaP79621 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CiitaP79621 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.42■□□□□ 0.86
CiitaP79621 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CiitaP79621 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.42■□□□□ 0.86
CiitaP79621 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CiitaP79621 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CiitaP79621 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.41■□□□□ 0.86
CiitaP79621 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CiitaP79621 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CiitaP79621 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CiitaP79621 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CiitaP79621 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.41■□□□□ 0.86
CiitaP79621 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.41■□□□□ 0.86
CiitaP79621 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CiitaP79621 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CiitaP79621 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CiitaP79621 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CiitaP79621 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CiitaP79621 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CiitaP79621 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CiitaP79621 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CiitaP79621 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CiitaP79621 Gm12527-201ENSMUST00000117967 564 ntBASIC20.4■□□□□ 0.86
CiitaP79621 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.4■□□□□ 0.86
CiitaP79621 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CiitaP79621 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.4■□□□□ 0.86
CiitaP79621 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.4■□□□□ 0.86
CiitaP79621 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.4■□□□□ 0.86
CiitaP79621 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CiitaP79621 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CiitaP79621 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CiitaP79621 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CiitaP79621 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CiitaP79621 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CiitaP79621 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CiitaP79621 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CiitaP79621 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CiitaP79621 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CiitaP79621 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
CiitaP79621 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CiitaP79621 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.39■□□□□ 0.85
CiitaP79621 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms