Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccr8P56484 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccr8P56484 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccr8P56484 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccr8P56484 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccr8P56484 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccr8P56484 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccr8P56484 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccr8P56484 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccr8P56484 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccr8P56484 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccr8P56484 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.15■□□□□ 0.18
Ccr8P56484 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.15■□□□□ 0.18
Ccr8P56484 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccr8P56484 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.15■□□□□ 0.18
Ccr8P56484 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.15■□□□□ 0.18
Ccr8P56484 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ccr8P56484 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccr8P56484 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccr8P56484 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccr8P56484 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccr8P56484 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccr8P56484 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccr8P56484 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccr8P56484 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccr8P56484 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.14■□□□□ 0.17
Ccr8P56484 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccr8P56484 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Ccr8P56484 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccr8P56484 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccr8P56484 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccr8P56484 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccr8P56484 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccr8P56484 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.14■□□□□ 0.17
Ccr8P56484 Gm38205-201ENSMUST00000192243 258 ntBASIC16.14■□□□□ 0.17
Ccr8P56484 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccr8P56484 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccr8P56484 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccr8P56484 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccr8P56484 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccr8P56484 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccr8P56484 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ccr8P56484 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccr8P56484 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccr8P56484 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccr8P56484 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccr8P56484 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccr8P56484 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ccr8P56484 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccr8P56484 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccr8P56484 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.13■□□□□ 0.17
Ccr8P56484 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.13■□□□□ 0.17
Ccr8P56484 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.13■□□□□ 0.17
Ccr8P56484 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccr8P56484 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccr8P56484 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ccr8P56484 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.12■□□□□ 0.17
Ccr8P56484 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.12■□□□□ 0.17
Ccr8P56484 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.12■□□□□ 0.17
Ccr8P56484 Gm10493-201ENSMUST00000097270 612 ntBASIC16.12■□□□□ 0.17
Ccr8P56484 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.12■□□□□ 0.17
Ccr8P56484 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ccr8P56484 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccr8P56484 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ccr8P56484 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.11■□□□□ 0.17
Ccr8P56484 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.11■□□□□ 0.17
Ccr8P56484 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccr8P56484 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccr8P56484 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms