Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atxn1P54254 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atxn1P54254 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atxn1P54254 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atxn1P54254 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atxn1P54254 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atxn1P54254 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atxn1P54254 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.67■□□□□ 0.58
Atxn1P54254 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Atxn1P54254 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atxn1P54254 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atxn1P54254 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Atxn1P54254 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atxn1P54254 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atxn1P54254 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.66■□□□□ 0.58
Atxn1P54254 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atxn1P54254 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atxn1P54254 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atxn1P54254 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atxn1P54254 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atxn1P54254 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atxn1P54254 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atxn1P54254 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Atxn1P54254 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.65■□□□□ 0.58
Atxn1P54254 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.65■□□□□ 0.58
Atxn1P54254 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.65■□□□□ 0.58
Atxn1P54254 Gm9987-201ENSMUST00000069768 567 ntBASIC18.65■□□□□ 0.58
Atxn1P54254 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atxn1P54254 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atxn1P54254 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atxn1P54254 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atxn1P54254 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atxn1P54254 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atxn1P54254 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atxn1P54254 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atxn1P54254 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atxn1P54254 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atxn1P54254 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atxn1P54254 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atxn1P54254 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Atxn1P54254 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Atxn1P54254 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Atxn1P54254 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atxn1P54254 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.63■□□□□ 0.57
Atxn1P54254 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Atxn1P54254 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atxn1P54254 Gm37055-201ENSMUST00000191866 133 ntBASIC18.63■□□□□ 0.57
Atxn1P54254 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.63■□□□□ 0.57
Atxn1P54254 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atxn1P54254 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atxn1P54254 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atxn1P54254 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atxn1P54254 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atxn1P54254 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atxn1P54254 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atxn1P54254 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atxn1P54254 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.63■□□□□ 0.57
Atxn1P54254 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atxn1P54254 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atxn1P54254 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atxn1P54254 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Atxn1P54254 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atxn1P54254 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.62■□□□□ 0.57
Atxn1P54254 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atxn1P54254 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atxn1P54254 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
Atxn1P54254 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.62■□□□□ 0.57
Atxn1P54254 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atxn1P54254 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atxn1P54254 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Atxn1P54254 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Atxn1P54254 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Atxn1P54254 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atxn1P54254 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atxn1P54254 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Atxn1P54254 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Atxn1P54254 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atxn1P54254 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atxn1P54254 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.6■□□□□ 0.57
Atxn1P54254 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.6■□□□□ 0.57
Atxn1P54254 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atxn1P54254 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atxn1P54254 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.6■□□□□ 0.57
Atxn1P54254 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atxn1P54254 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atxn1P54254 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Atxn1P54254 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms