Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pdx1P52946 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Pdx1P52946 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pdx1P52946 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pdx1P52946 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pdx1P52946 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdx1P52946 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdx1P52946 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pdx1P52946 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdx1P52946 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Pdx1P52946 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pdx1P52946 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pdx1P52946 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
Pdx1P52946 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdx1P52946 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdx1P52946 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pdx1P52946 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdx1P52946 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdx1P52946 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Pdx1P52946 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pdx1P52946 Golph3-205ENSMUST00000228671 2842 ntBASIC18.6■□□□□ 0.57
Pdx1P52946 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.59■□□□□ 0.57
Pdx1P52946 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Pdx1P52946 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.59■□□□□ 0.57
Pdx1P52946 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pdx1P52946 Gm10849-201ENSMUST00000100397 618 ntBASIC18.59■□□□□ 0.57
Pdx1P52946 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.59■□□□□ 0.57
Pdx1P52946 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pdx1P52946 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.59■□□□□ 0.57
Pdx1P52946 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.59■□□□□ 0.57
Pdx1P52946 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.59■□□□□ 0.57
Pdx1P52946 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pdx1P52946 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdx1P52946 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdx1P52946 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdx1P52946 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdx1P52946 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdx1P52946 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdx1P52946 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Pdx1P52946 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdx1P52946 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdx1P52946 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdx1P52946 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdx1P52946 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pdx1P52946 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdx1P52946 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pdx1P52946 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdx1P52946 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pdx1P52946 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdx1P52946 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pdx1P52946 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pdx1P52946 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdx1P52946 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdx1P52946 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdx1P52946 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pdx1P52946 Gm42569-201ENSMUST00000200539 472 ntBASIC18.57■□□□□ 0.56
Pdx1P52946 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdx1P52946 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdx1P52946 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.57■□□□□ 0.56
Pdx1P52946 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.57■□□□□ 0.56
Pdx1P52946 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pdx1P52946 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Pdx1P52946 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdx1P52946 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdx1P52946 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdx1P52946 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.57■□□□□ 0.56
Pdx1P52946 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdx1P52946 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pdx1P52946 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pdx1P52946 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Pdx1P52946 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.56■□□□□ 0.56
Pdx1P52946 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdx1P52946 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.56■□□□□ 0.56
Pdx1P52946 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pdx1P52946 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdx1P52946 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdx1P52946 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdx1P52946 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdx1P52946 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdx1P52946 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.56■□□□□ 0.56
Pdx1P52946 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.56■□□□□ 0.56
Pdx1P52946 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.56■□□□□ 0.56
Pdx1P52946 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdx1P52946 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdx1P52946 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdx1P52946 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdx1P52946 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms