Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF144AP50876 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RNF144AP50876 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF144AP50876 IGHV3-19-201ENST00000521488 291 ntBASIC19.79■□□□□ 0.76
RNF144AP50876 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF144AP50876 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF144AP50876 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF144AP50876 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF144AP50876 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF144AP50876 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF144AP50876 AL024507.2-201ENST00000606070 2574 ntBASIC19.79■□□□□ 0.76
RNF144AP50876 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RNF144AP50876 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF144AP50876 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF144AP50876 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF144AP50876 AP004607.7-201ENST00000527152 1677 ntBASIC19.78■□□□□ 0.76
RNF144AP50876 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RNF144AP50876 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RNF144AP50876 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF144AP50876 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF144AP50876 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF144AP50876 AC142381.2-201ENST00000566120 298 ntBASIC19.78■□□□□ 0.76
RNF144AP50876 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF144AP50876 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF144AP50876 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF144AP50876 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF144AP50876 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF144AP50876 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF144AP50876 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RNF144AP50876 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF144AP50876 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF144AP50876 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF144AP50876 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF144AP50876 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF144AP50876 SUDS3P1-201ENST00000505831 966 ntBASIC19.77■□□□□ 0.76
RNF144AP50876 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RNF144AP50876 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF144AP50876 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RNF144AP50876 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF144AP50876 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF144AP50876 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF144AP50876 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF144AP50876 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF144AP50876 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RNF144AP50876 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RNF144AP50876 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF144AP50876 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF144AP50876 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF144AP50876 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF144AP50876 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF144AP50876 AC133561.4-201ENST00000566112 224 ntBASIC19.76■□□□□ 0.75
RNF144AP50876 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF144AP50876 SMUG1P1-201ENST00000590640 811 ntBASIC19.76■□□□□ 0.75
RNF144AP50876 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF144AP50876 AC005837.3-201ENST00000612163 286 ntBASIC19.76■□□□□ 0.75
RNF144AP50876 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF144AP50876 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF144AP50876 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF144AP50876 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF144AP50876 RASA4CP-201ENST00000424092 1398 ntBASIC19.75■□□□□ 0.75
RNF144AP50876 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF144AP50876 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF144AP50876 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF144AP50876 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.75■□□□□ 0.75
RNF144AP50876 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF144AP50876 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF144AP50876 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF144AP50876 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF144AP50876 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF144AP50876 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RNF144AP50876 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF144AP50876 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF144AP50876 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF144AP50876 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF144AP50876 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF144AP50876 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF144AP50876 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF144AP50876 MIR638-201ENST00000385237 100 ntBASIC19.74■□□□□ 0.75
RNF144AP50876 AC091305.1-201ENST00000479476 895 ntBASIC19.74■□□□□ 0.75
RNF144AP50876 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.74■□□□□ 0.75
RNF144AP50876 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RNF144AP50876 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF144AP50876 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
RNF144AP50876 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF144AP50876 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF144AP50876 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RNF144AP50876 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms