Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh2P43247 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh2P43247 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.38■□□□□ 0.69
Msh2P43247 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Msh2P43247 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh2P43247 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.38■□□□□ 0.69
Msh2P43247 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh2P43247 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh2P43247 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh2P43247 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh2P43247 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh2P43247 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh2P43247 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh2P43247 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh2P43247 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Msh2P43247 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh2P43247 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh2P43247 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh2P43247 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh2P43247 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.37■□□□□ 0.69
Msh2P43247 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Msh2P43247 Gm43017-201ENSMUST00000198296 752 ntBASIC19.37■□□□□ 0.69
Msh2P43247 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Msh2P43247 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh2P43247 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh2P43247 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh2P43247 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.36■□□□□ 0.69
Msh2P43247 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Msh2P43247 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Msh2P43247 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Msh2P43247 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh2P43247 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Msh2P43247 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.35■□□□□ 0.69
Msh2P43247 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.35■□□□□ 0.69
Msh2P43247 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh2P43247 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.35■□□□□ 0.69
Msh2P43247 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Msh2P43247 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh2P43247 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh2P43247 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh2P43247 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Msh2P43247 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.34■□□□□ 0.69
Msh2P43247 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Msh2P43247 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh2P43247 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh2P43247 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh2P43247 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.33■□□□□ 0.69
Msh2P43247 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh2P43247 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh2P43247 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Msh2P43247 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Msh2P43247 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Msh2P43247 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh2P43247 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh2P43247 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh2P43247 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Msh2P43247 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Msh2P43247 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh2P43247 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.32■□□□□ 0.68
Msh2P43247 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh2P43247 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh2P43247 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh2P43247 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh2P43247 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Msh2P43247 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Msh2P43247 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh2P43247 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh2P43247 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.32■□□□□ 0.68
Msh2P43247 Serp2-204ENSMUST00000228055 705 ntBASIC19.32■□□□□ 0.68
Msh2P43247 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh2P43247 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh2P43247 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.32■□□□□ 0.68
Msh2P43247 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.32■□□□□ 0.68
Msh2P43247 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.32■□□□□ 0.68
Msh2P43247 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh2P43247 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh2P43247 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Msh2P43247 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Msh2P43247 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh2P43247 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh2P43247 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.31■□□□□ 0.68
Msh2P43247 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.31■□□□□ 0.68
Msh2P43247 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh2P43247 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Msh2P43247 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh2P43247 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms