Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Slc6a1P31648 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.17■□□□□ 0.18
Slc6a1P31648 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.17■□□□□ 0.18
Slc6a1P31648 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.17■□□□□ 0.18
Slc6a1P31648 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc6a1P31648 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a1P31648 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a1P31648 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a1P31648 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.16■□□□□ 0.18
Slc6a1P31648 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a1P31648 Gm9847-201ENSMUST00000052528 599 ntBASIC16.16■□□□□ 0.18
Slc6a1P31648 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a1P31648 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Slc6a1P31648 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a1P31648 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a1P31648 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a1P31648 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a1P31648 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a1P31648 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a1P31648 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Slc6a1P31648 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a1P31648 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a1P31648 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a1P31648 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a1P31648 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a1P31648 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a1P31648 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Slc6a1P31648 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a1P31648 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Slc6a1P31648 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Slc6a1P31648 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a1P31648 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Slc6a1P31648 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.14■□□□□ 0.17
Slc6a1P31648 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a1P31648 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a1P31648 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.14■□□□□ 0.17
Slc6a1P31648 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a1P31648 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a1P31648 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a1P31648 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a1P31648 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a1P31648 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a1P31648 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a1P31648 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a1P31648 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a1P31648 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.13■□□□□ 0.17
Slc6a1P31648 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a1P31648 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a1P31648 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Slc6a1P31648 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.13■□□□□ 0.17
Slc6a1P31648 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a1P31648 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a1P31648 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a1P31648 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a1P31648 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a1P31648 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.12■□□□□ 0.17
Slc6a1P31648 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a1P31648 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Slc6a1P31648 Mir6236-201ENSMUST00000184437 123 ntBASIC16.12■□□□□ 0.17
Slc6a1P31648 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a1P31648 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Slc6a1P31648 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a1P31648 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a1P31648 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a1P31648 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.11■□□□□ 0.17
Slc6a1P31648 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a1P31648 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a1P31648 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a1P31648 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a1P31648 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Slc6a1P31648 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Slc6a1P31648 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a1P31648 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a1P31648 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.11■□□□□ 0.17
Slc6a1P31648 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Slc6a1P31648 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.11■□□□□ 0.17
Slc6a1P31648 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a1P31648 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a1P31648 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a1P31648 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a1P31648 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a1P31648 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a1P31648 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a1P31648 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a1P31648 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a1P31648 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.1■□□□□ 0.17
Slc6a1P31648 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a1P31648 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a1P31648 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Slc6a1P31648 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a1P31648 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a1P31648 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a1P31648 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms