Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.71■□□□□ 0.59
Nckap1P28660 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.71■□□□□ 0.59
Nckap1P28660 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.71■□□□□ 0.59
Nckap1P28660 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nckap1P28660 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nckap1P28660 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nckap1P28660 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nckap1P28660 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nckap1P28660 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nckap1P28660 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.71■□□□□ 0.59
Nckap1P28660 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.71■□□□□ 0.59
Nckap1P28660 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Nckap1P28660 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1P28660 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1P28660 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1P28660 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1P28660 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.7■□□□□ 0.58
Nckap1P28660 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1P28660 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1P28660 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.7■□□□□ 0.58
Nckap1P28660 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.7■□□□□ 0.58
Nckap1P28660 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.7■□□□□ 0.58
Nckap1P28660 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.7■□□□□ 0.58
Nckap1P28660 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1P28660 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1P28660 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1P28660 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1P28660 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1P28660 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nckap1P28660 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Nckap1P28660 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nckap1P28660 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Nckap1P28660 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
Nckap1P28660 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.69■□□□□ 0.58
Nckap1P28660 Gm26524-201ENSMUST00000192339 390 ntBASIC18.69■□□□□ 0.58
Nckap1P28660 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nckap1P28660 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nckap1P28660 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nckap1P28660 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.69■□□□□ 0.58
Nckap1P28660 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nckap1P28660 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nckap1P28660 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nckap1P28660 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nckap1P28660 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nckap1P28660 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nckap1P28660 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nckap1P28660 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nckap1P28660 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nckap1P28660 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nckap1P28660 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nckap1P28660 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.68■□□□□ 0.58
Nckap1P28660 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.68■□□□□ 0.58
Nckap1P28660 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nckap1P28660 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nckap1P28660 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nckap1P28660 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nckap1P28660 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nckap1P28660 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nckap1P28660 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nckap1P28660 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nckap1P28660 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Nckap1P28660 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nckap1P28660 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nckap1P28660 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Nckap1P28660 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nckap1P28660 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nckap1P28660 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.67■□□□□ 0.58
Nckap1P28660 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nckap1P28660 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.67■□□□□ 0.58
Nckap1P28660 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nckap1P28660 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nckap1P28660 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nckap1P28660 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nckap1P28660 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nckap1P28660 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nckap1P28660 Gm13168-201ENSMUST00000121771 632 ntBASIC18.66■□□□□ 0.58
Nckap1P28660 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nckap1P28660 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nckap1P28660 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nckap1P28660 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Nckap1P28660 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nckap1P28660 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nckap1P28660 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.66■□□□□ 0.58
Nckap1P28660 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.66■□□□□ 0.58
Nckap1P28660 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nckap1P28660 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nckap1P28660 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.65■□□□□ 0.58
Nckap1P28660 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nckap1P28660 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nckap1P28660 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nckap1P28660 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nckap1P28660 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.65■□□□□ 0.58
Nckap1P28660 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nckap1P28660 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nckap1P28660 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nckap1P28660 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nckap1P28660 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nckap1P28660 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nckap1P28660 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nckap1P28660 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms